Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810295.1_cds_XP_016496146.1_10397
CDS Infomation

[gene=LOC107815142] [db_xref=GeneID:107815142] [protein=probable eukaryotic translation initiation factor 5-1] [protein_id=XP_016496146.1] [location=95341..96732] [gbkey=CDS]
Sequence

ATGGCTTTGCAAAACATTGGTGCCGGAAACAAGGATGATGCCTTTTACAGGTACAAGATG
CCAAGAATGATTACAAAGATAGAAGGTCGTGGAAATGGCATCAAGACTAATGTGGTGAAC
ATGGTTGACATTGCCAAGGCATTGGGCAGGCCAGCATCATACACCACAAAGTATTTTGGC
TGTGAACTCGGAGCTCAGTCTAAATTTGATGAGAAAACAGGTACCTCTCATGTTAATGGT
GCCCATGACACTGCAAAGCTTGCTGGACTTCTTGAGAACTTCATCAAAAAATATGTTCAA
TGCTATGGCTGCAGGAATCCTGAAACTGAGATTTTGATCACAAAATCACAGATGTTAACC
CTTAAGTGTGCTGCGTGTGGCTTTATCTCTGATGTTGATATGAGGGACAAGCTCACCACA
TTTATTCTCAAGAACCCTCCTGAGCAGAAGAAGGGATCTAAAGATAAAAAGGCAATGAGG
AGGGCTGAAAAAGAACGCCTCAAAGAAGGGGAAGCAGCAGATGAGGAGGCAAAGAAACTC
AAGAAAGAGGCTGCAAAGAAAAAAGGTTCCTCAAAGGATGGTTCGTCAAAAATATCTAAG
AAAAAGGCCAATGTGTCAGATGAGGAGCACTCTCCCACTGGTAGCCAAGCTGATCAGACC
GAAGCGCCACCTGCTGACAGTGATGATGATGTTGAATGGCAGACGGACACCTCCATGGCA
GCAGCCCAGCAGCGAATTCAGGAGCAGCTGAATGCTGTTACTGCTAGCATGGTTATGCTT
TCGGCAACTGAAGAGAAGTCTGGCAAAAGCTCACCAGCACGTGAGGAGAAGCTCAAGGCC
AACGGGCAAGGCACTGGTGTTAGTAATTCCAAAGAGTCGCTTGTTGCACAGACCAATGGT
GTTAAGCGTAGCAATTCCAAGGAGAAGCTTGTTGATGCTAAAGAGAGTCTTGCTGATGAA
ATCAAGGAACACCTGAATAAGGGTTCATCTGTGGCTCAGCTGAAGTCCTTCTTGGGCTCT
ATTTCTGGAACTCATCAAGACATTGTTGATGCATTGTTTGAAGCTCTTTTTGGTGGAGTT
GGAAAAGGTTTTTCCAAGGAGGTGACCAAGAAAAAAATTTATCTTGCAGCTGTTCTACAG
GAAGATGGTTCGCAGCTAGCTCTACTACATGCTATTGAGTCATTTTGTGGAAAATCAAGC
TCAGAAGCTGTAAAGGAGGTTGCGTTGGTTCTGAAAGCACTTTATGACGTTGATATGCTG
GAAGAGGAGCTTATTGTGGAGTGGTATGAGAAGGGATCGAAAAGTAGCAACAAACTCTCC
CCAATCTGGAAGAATGTTAAGCCATTTGTTGAGTGGCTGCAGAGTGCCGAGTCTGAAACT
GAGGATGAGTAA

Peptide Sequence

PEP ID

XP_016496146.1
PEP Infomation

PREDICTED: probable eukaryotic translation initiation factor 5-1 [Nicotiana tabacum]
Sequence

MALQNIGAGNKDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALGRPASYTTKYFG
CELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCRNPETEILITKSQMLT
LKCAACGFISDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEEAKKL
KKEAAKKKGSSKDGSSKISKKKANVSDEEHSPTGSQADQTEAPPADSDDDVEWQTDTSMA
AAQQRIQEQLNAVTASMVMLSATEEKSGKSSPAREEKLKANGQGTGVSNSKESLVAQTNG
VKRSNSKEKLVDAKESLADEIKEHLNKGSSVAQLKSFLGSISGTHQDIVDALFEALFGGV
GKGFSKEVTKKKIYLAAVLQEDGSQLALLHAIESFCGKSSSEAVKEVALVLKALYDVDML
EEELIVEWYEKGSKSSNKLSPIWKNVKPFVEWLQSAESETEDE

Transcript Sequence

Gene sequence data has not been registered.